DisGeNET - a database of gene-disease associations

List of associated variants

Malignant neoplasm of prostate, C0376358

Source: CURATED ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs4245739	MDM4	0.708	0.360	1	204549714	3 prime UTR variant	C/A;G	snv	0.77; 6.2E-06		6
rs1058205	KLK3	0.925	0.080	19	50860142	3 prime UTR variant	C/T	snv	0.75	0.74	2
rs1799983	NOS3	0.430	0.880	7	150999023	missense variant	T/A;G	snv	0.75		1
rs1982151	RMI1	0.807	0.120	9	84002350	missense variant	A/G;T	snv	0.73		1
rs1058808	ERBB2	0.658	0.360	17	39727784	missense variant	C/G	snv	0.61	0.52	1
rs1800470	TGFB1	0.515	0.840	19	41353016	missense variant	G/A;C	snv	0.55; 2.4E-04		1
rs7041	GC	0.576	0.800	4	71752617	missense variant	A/C;T	snv	0.52; 4.0E-06		3
rs3213764	ATF7IP	0.925	0.080	12	14434367	missense variant	A/G	snv	0.47	0.42	1
rs2236225	MTHFD1	0.614	0.640	14	64442127	missense variant	G/A	snv	0.44	0.38	1
rs5498	ICAM4 ; ICAM1	0.531	0.760	19	10285007	missense variant	A/G	snv	0.44	0.37	2
rs11096957	TLR10	0.790	0.160	4	38774870	missense variant	T/G	snv	0.42	0.41	1
rs231775	CTLA4	0.504	0.720	2	203867991	missense variant	A/G;T	snv	0.42; 4.0E-06		1
rs11096955	TLR10	0.851	0.200	4	38774486	missense variant	T/C;G	snv	4.3E-06; 0.41		1
rs6465657	LMTK2	0.807	0.280	7	98187015	intron variant	C/T	snv	0.41	0.37	3
rs11614913	HOXC6 ; MIR196A2	0.512	0.760	12	53991815	mature miRNA variant	C/T	snv	0.39	0.34	1
rs10948059	CNPY3-GNMT ; GNMT	0.925	0.080	6	42960723	upstream gene variant	C/G;T	snv	0.39		1
rs2854746	IGFBP3	0.752	0.200	7	45921046	missense variant	G/A;C;T	snv	0.38		1
rs4833095	TLR1	0.662	0.480	4	38798089	missense variant	T/C	snv	0.38	0.44	4
rs662	PON1	0.485	0.840	7	95308134	missense variant	T/C	snv	0.38	0.42	4
rs4644	LGALS3	0.732	0.320	14	55138217	missense variant	C/A;G	snv	0.35		1
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	1
rs351855	FGFR4	0.597	0.560	5	177093242	missense variant	G/A	snv	0.33	0.26	4
rs13181	KLC3 ; ERCC2	0.487	0.760	19	45351661	stop gained	T/A;G	snv	4.0E-06; 0.32		1
rs1801133	MTHFR	0.472	0.880	1	11796321	missense variant	G/A	snv	0.31	0.27	6
rs486907	RNASEL	0.667	0.360	1	182585422	missense variant	C/T	snv	0.31	0.28	1